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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … within the focused topic areas that can be completed on an accelerated timeline as compared with the standard CSP … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines … microbial and viral activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … do some sort of slightly novel chemistry. That’s just how evolution works. So if secondary metabolism is really …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … basis of their behavior in the environment.  The JGI genome sequences and metabolomes of microbes and microbial … cycles, as well as atmospheric particle formation and evolution.  Data from such studies is expected to advance a …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … And I found her review in natural product reports on the evolution of genome mining and microbes with Mohammad … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … bright guy who’s been thinking for a long time about the evolution and natural products systems. This conversation … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …