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Publication Policy
… The purpose of this policy is to establish communication norms around JGI … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … JGI staff will provide Users with a list of contributors and their corresponding ORCiD and relevant CRediT …
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XA21-mediated resistance to Xanthomonas oryzae pv. oryzae is dose dependent
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Publications
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines …
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Institutional User Agreements
… Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Data Policy
… of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … Episode Transcript … genome mining over the years, and we talk about a new publication out of JGI in Nature Biotechnology , for which …
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FICUS
… call represents a unique opportunity for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … the project motivation, experimental design, capabilities to be used and DOE mission relevance. LOIs allow the JGI and …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … And that’s something that we are trying to do in our independent lab now is use these as a resource for natural …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid … technology advances in management, processing and visualization of “big data,” and artificial … discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … information. It could be a very unstable interaction, mediated by this antibiotic. So you can start looking into … our own applications. Nowadays, we talk about antibiotic resistance, and I was talking to my daughters– what did they …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   … and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE …
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