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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… The Community Science Program Large Scale call is focused on genomic science projects that … For the CSP Large Scale call, a Letter of Intent (LOI) is required by the due …

… to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    … which challenge our understanding of viral complexity and evolution Our research focuses on discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …

… at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … The Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … often the things that suffer first when it comes to genome assembly. Some of the common biosynthetic systems – like a … might be everywhere, but only at a certain kind of coarse scale. DAN UDWARY: Yeah I think that’s right. That’s why I …

… from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, … biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. The … pathway design, and efforts to refactor entire chromosomes, such as a yeast chromosome project. These …

… Biology is currently experiencing a revolution brought on by rapid developments in genomics and … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … as well as the development of novel methods to enable large-scale comparative analysis, mining and visualization of big …

… know what they’re looking at, and hard to do on a large scale. And so– Marnix Medema: But in the end, I do feel that … pathway even if the genes are scrambled or altered in the chromosome. And so it becomes very difficult then to compare … clusters. And then they sequenced a really nice and good assembly. They were able to assemble a really high quality …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … So he could see really into this– so he could look into the structure, really seeing that. And I’m always just looking … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …