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… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … working with the JGI 120 genomes claimed (or about one per student) Seven student-drafted articles accepted with over 20 more in …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … of data produced at the facility, provided this is done in a timely fashion. The publications resulting from …

The program also collaborates with isolate collections to complete large-scale sequencing projects, including 10,000 … data for further microbial research and applications. One key program goal is focused on establishing data driven … of the microbial product catalog : Beyond minimal draft and improved draft microbial genomes the program …

… sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the  MassIVE … small genes assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence … coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome shotgun …

… what genome mining is, if I want to explain that to someone who doesn’t know much about genetics or anything else, … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … what looked to be novel biosynthetic gene clusters, like completely new things that we haven’t seen before. And so …

… and expertise of multiple DOE National User Facilities in one research proposal.  Successful applications will focus … proposals within the focused topic areas that can be completed on an accelerated timeline as compared with the … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… for a while. Moving forward, I’m hoping to get a new one out every two weeks. This time, we’ve got a great … natural product producing organism, the Actinomyces, was completed in early 2000s. One of the major discovery from … from 40, 50 all the way to the 2010s, so spans more than seven decades. And think about today, right? Is it possible …

… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … called Ecopia was talking about a gene cluster a week. They completed a gene cluster per week. And that really got me … new gene cluster. And then they would find it in seven other organisms. And one of those would just produce …

The Metagenome Program uses advanced sequencing technologies to … such as carbon cycling, nutrient cycling, and energy flow. One of the key goals of the Program is to develop a deeper … assembly and binning have enabled reconstruction of complete or near-complete population genomes directly from …

When submitting sequences to the JGI DNA Synthesis program, please include … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …