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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …
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Microbial Ecology and Site Characteristics Underlie Differences in Salinity‐Methane Relationships in Coastal Wetlands
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Publications
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … for integrating data into IMG/M (see IMG/M submission site ). The Integrated Microbial Genomes (IMG) system serves …
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Natural Prodcast Episode 18: A CSP Primer
… and natural product molecules obviously play a huge role in ecology through cell-cell communication, chemical warfare, … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… a term that is not useful, then I think it needs to be revisited. And I think that a secondary metabolism as a field, … UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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FICUS
… provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … introduces the NEON resource, a network of field research sites designed to collect long-term open access ecological … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …
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Environmental Genomics Group
… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. 10.1016/j.tim.2019.03.003 … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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How To Use Our Systems
… … Information on Software Looking for information on our software, including BBTools ? Click to find that on our archive site.  …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial … there were certain patterns of amino acids in the active site of the protein that would lead you to basically putting …
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