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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not …

… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … so many bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from …

… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom … environments. Integrating metatranscriptomes and metagenomes can, for instance, deepens our understanding of …

… mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for … produced nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … for microbial eukaryotes, build fungal and algal pangenomes, and integrate multi-omics tools to enhance …

… PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … repositories until the earliest of three points:  (1) publication of the data (including, but not limited to, publication or citation of accession numbers in a …

… provides customized analysis, the JGI also participates in publication of results. Go here for a video and Q&A with …

… And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me into that because we had these new genomes that JGI had sequenced that were of these bacteria … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… provides customized analysis, the JGI also participates in publication of results. …