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… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  Successful applications will focus on high-risk/high-payoff proposals within the focused topic … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …

… scientific discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE … such factors as genome size, polymorphism level, sample quality and availability, etc.   During scientific peer … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … but in subtle ways that affect fitness. And so, doing a high level kind of analysis, you just might not be able to …

… protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting step for many projects at … collection and storage (from PacBio) Best practices for High Molecular Weight DNA extraction and quality control … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … using long-read sequencing. Exact library types and quality of finished product depend on genome. Selected … ( IMG ) 280/298 Microbial Improved Draft, Isolate High quality draft assembly of long-read sequence data, …

Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … lowering costs. Staff process samples, perform quality checks, and prep libraries for sequencing. They apply Lean Six …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …