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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure … research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from … bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … research in synthetic biology, the program enables the design and synthesis of complex genetic pathways and …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group … Biology Program .  Representative software includes: gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST … For further details, please reach out to the Group Lead …
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Synthesis
…   The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers … group and focused on new technologies and optimizing tools — including strain engineering — to make them more … up to ~150 Kb in length  Pooled libraries such as sgRNA, promoter or MoClo assemblies …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from … insights from sequence data, employing IMG data and tools for comparative analysis, visualization and …
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, … For the CSP Large Scale call, a Letter of Intent (LOI) is … All proposals will be externally peer-reviewed for …
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … Exploring the fascinating world of giant viruses, which challenge our …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of … through end-to-end automation — and further advancing sequence applications, single cell genomics, DNA synthesis, …   Overview of sequencing products The JGI operates highly scaled short- and long-read sequencing pipelines. This …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Our research focuses on the assembly of metagenomic sequence data … interactions, evolution, and adaptation, ultimately informing strategies for environmental monitoring, …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, … Multiomics approaches such as metagenomics and metatranscriptomics …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … requests not on this list, or to discuss experimental design for a proposal, we encourage you to contact the …
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