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… The purpose of this policy is to establish communication norms around JGI contributions, ensure … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from …

… The Community Science Program Large Scale call is focused on genomic science projects … biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research (BER) program … For the CSP Large Scale call, a Letter of Intent (LOI) is required by the due …

… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, … biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. The …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … might be everywhere, but only at a certain kind of coarse scale. DAN UDWARY: Yeah I think that’s right. That’s why I …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … applications. The program provides high-quality, large-scale genomic data to advance microbial research that drives … collaborates with isolate collections to complete large-scale sequencing projects, including 10,000 Actinomycetota …

… in our bedroom together with us still while she’s still four months old. So it’s not a bad location for a little … know what they’re looking at, and hard to do on a large scale. And so– Marnix Medema: But in the end, I do feel that … pathway even if the genes are scrambled or altered in the chromosome. And so it becomes very difficult then to compare …

… Our research is focused on the discovery and characterization of … data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … interactions, over ecological and evolutionary time scales.The Metagenome Program combines large-scale, … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom …

… As a National User Facility, the JGI serves more than 2,500 … 20 years of industry experience — and an opportunity to expand the JGI’s portfolio of user companies. Now the … data flows and promote novel data applications. As a large-scale data generator, the JGI has a key role to play in …