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… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome …

… The Community Science Program Large Scale call is focused on genomic science projects that … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …

… data flows and promote novel data applications. As a large-scale data generator, the JGI has a key role to play in … state-of-the-art sample processing.  Our Biodesign platform enables users to test hypotheses via designed and assembled … and environmental samples by using advanced computer analysis coupled with liquid chromatography mass …

… that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … A primary purpose of this project is to bring educators from a broad range of … sequence data, employing IMG data and tools for comparative analysis, visualization and interpretation using public …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … potential of hard-to-culture microorganisms. This process enables our users to explore the genetic makeup of microbial …

… The User Support Analysis group provides computational analysis for new … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product … pipelines for standard sequencing products performed at scale. Our group also performs ‘proof-of principle’ research …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … DNA in natural environments, the Program provides a snapshot of microbial diversity and their metabolic functional …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … of “big data,” and artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … as well as the development of novel methods to enable large-scale comparative analysis, mining and visualization of big …

… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … already basically there. We were just seeking out the last few pieces and trying to understand the enzymology. So we … put out some software called DeepBGC , which is a machine learning tool that tries to look at patterns of Pfams …