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Publication Policy
JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Publications
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Diversification of mandarin citrus by hybrid speciation and apomixis
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in … agriculture, carbon sequestration and biotechnology. … Diversification of the microbial product catalog : Beyond …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … genus, which gives us lemons, kumquats, limes, pomelos, mandarins, sweet oranges, and more. Unlike citrus, …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their pairwise AF and ANI … of cliques, it has also become possible to identify speciation events within existing species. Within the JGI’s …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … can just mediate so many kinds of interactions. And by understanding them, we can promote the health and … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … beyond what each of these facilities could generate by itself.   Accepted projects must address or be otherwise … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
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