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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into … potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … statement where indicated. If you use data from 4 or more proposals, include those DOIs in a data availability …
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AraR plays a more dominant role than XlnR in plant biomass conversion in Penicillium subrubescens
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint … within, say, the sponges or other things. And we know lots more about microbiomes and symbionts that live with other … a brief history of drug discovery and natural products’ role in it. All right, this is probably one of the most …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user … JGI unites the expertise at Berkeley Lab,  Lawrence Livermore National Laboratory and the HudsonAlpha Institute for … United States is one of the world’s largest consumers of petroleum, most of which is used for transportation and …
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Natural Prodcast Episode 17: Cassandra Quave
… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast … to say it’s so awesome! For those of you want to understand more about natural products and drug discovery, or the … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and … to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … mechanisms that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. …
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Publications
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint … simpler systems, like bacteria, where we figure we can make more progress faster, which is sometimes true. Other people, … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy … it falls short, and maybe what we should be saying to be more clear about what we mean. So if you want to learn about … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Seven student-drafted articles accepted with over 20 more in draft Efforts in ongoing curriculum development and …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy … just come out where I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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