Publications
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Metagenome
Microbial
NERSC FICUS
Morgan-Lang, C. et al. (2023) A Guide to Gene‐Centric Analysis Using TreeSAPP. Current Protocols. 10.1002/cpz1.671
Fungal & Algal
Genomic Technologies
Community Science Program
Vigneaud, J. et al. (2023) DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus. New Phytologist. 10.1111/nph.18734
Fungal & Algal
Genomic Technologies
Community Science Program
Maillard, F. et al. (2023) Functional genomics gives new insights into the ectomycorrhizal degradation of chitin. New Phytologist. 10.1111/nph.18773
Fungal & Algal
Genomic Technologies
EMSL FICUS
Kun, R. S. et al. (2023) The transcriptional activator ClrB is crucial for the degradation of soybean hulls and guar gum in Aspergillus niger. Fungal Genetics and Biology. 10.1016/j.fgb.2023.103781
Metagenome
Microbial
Mukherjee, S. et al. (2023) Standardized naming of microbiome samples in Genomes OnLine Database.. Database. 10.1093/database/baad001
Metagenome
Viral
Community Science Program
Gilbert, N. E. et al. (2023) Giant Virus Infection Signatures Are Modulated by Euphotic Zone Depth Strata and Iron Regimes of the Subantarctic Southern Ocean. mSystems. 10.1128/msystems.01260-22
DNA Synthesis
Bioenergy Research Centers
Wu, Z. et al. (2023) Metabolic engineering of low-pH-tolerant non-model yeast, Issatchenkia orientalis, for production of citramalate. Metabolic Engineering Communications. 10.1016/j.mec.2023.e00220
Fungal & Algal
Genomic Technologies
Metagenome
Community Science Program
Duncan, A. et al. (2023) Dataset of 143 metagenome-assembled genomes from the Arctic and Atlantic Oceans, including 21 for eukaryotic organisms. Data in Brief. 10.1016/j.dib.2023.108990
Genomic Technologies
Grosjean, N. et al. (2023) Whisperings from not so silent mutations. Nature Reviews Microbiology. 10.1038/s41579-023-00864-8
Metagenome
Viral
Simmonds, P. et al. (2023) Four principles to establish a universal virus taxonomy. PLOS Biology. 10.1371/journal.pbio.3001922
Fungal & Algal
Community Science Program
Vittorelli, N. et al. (2023) Stepwise recombination suppression around the mating-type locus in an ascomycete fungus with self-fertile spores. PLOS Genetics. 10.1371/journal.pgen.1010347
Plant
Community Science Program
Liu, X. et al. (2023) Comparative Genomic Analyses of Cellulolytic Machinery Reveal Two Nutritional Strategies of Marine Labyrinthulomycetes Protists. Microbiology Spectrum. 10.1128/spectrum.04247-22