Publications

Barnett, S. E. et al. (2023) Genomic Features Predict Bacterial Life History Strategies in Soil, as Identified by Metagenomic Stable Isotope Probing. mBio. 10.1128/mbio.03584-22

Nowinski, B. et al. (2023) Ecological divergence of syntopic marine bacterial species is shaped by gene content and expression. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1038/s41396-023-01390-4

Baltoumas, F. A. et al. (2023) Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters. Frontiers in Bioinformatics. 10.3389/fbinf.2023.1157956

Schmid, R. et al. (2023) Integrative analysis of multimodal mass spectrometry data in MZmine 3. Nature Biotechnology. 10.1038/s41587-023-01690-2

Naughton, H. R. et al. (2023) Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils. Soil Biology and Biochemistry. 10.1016/j.soilbio.2023.108962

Klonowska, A. et al. (2023) Discovery of a novel filamentous prophage in the genome of the Mimosa pudica microsymbiont Cupriavidus taiwanensis STM 6018. Frontiers in Microbiology. 10.3389/fmicb.2023.1082107

Rasor, B. J. et al. (2023) Cell Extracts from Bacteria and Yeast Retain Metabolic Activity after Extended Storage and Repeated Thawing. ACS Synthetic Biology. 10.1021/acssynbio.2c00685

Sierra-Patev, S. et al. (2023) A global phylogenomic analysis of the shiitake genus Lentinula. Proceedings of the National Academy of Sciences of the United States of America. 10.1073/pnas.2214076120

Feurtey, A. et al. (2023) A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen. Nature Communications. 10.1038/s41467-023-36674-y

Zhao, J. et al. (2023) Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils. Frontiers in Microbiology. 10.3389/fmicb.2023.1140487

Howe, A. et al. (2023) Seasonal activities of the phyllosphere microbiome of perennial crops. Nature Communications. 10.1038/s41467-023-36515-y

Plett, J. M. et al. (2023) Speciation Underpinned by Unexpected Molecular Diversity in the Mycorrhizal Fungal Genus Pisolithus. Molecular Biology and Evolution. 10.1093/molbev/msad045