Publications
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Genomic Technologies
Metabolomics
Bioenergy Research Centers
Markel, K. et al. (2024) Cynipid wasps systematically reprogram host metabolism and restructure cell walls in developing galls. Plant Physiology. 10.1093/plphys/kiae001
Plant
Grones, C. et al. (2024) Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics. The Plant Cell. 10.1093/plcell/koae003
Microbial
Community Science Program
Marinos, G. et al. (2024) Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics.. Microbiology Spectrum. 10.1128/spectrum.01144-23
Metagenome
Community Science Program
Lumian, J. et al. (2024) Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock. Frontiers in Microbiology. 10.3389/fmicb.2023.1330602
Fungal & Algal
Genomic Technologies
Community Science Program
Ben Ayed, A. et al. (2024) Genome sequencing of Porostereum spadiceum to study the degradation of levofloxacin. Ecotoxicology and Environmental Safety. 10.1016/j.ecoenv.2023.115808
Metagenome
Community Science Program
Zepernick, B. N. et al. (2024) Declines in ice cover are accompanied by light limitation responses and community change in freshwater diatoms. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1093/ismejo/wrad015
Microbial
Community Science Program
Sher, A. W. et al. (2024) Dynamic nitrogen fixation in an aerobic endophyte of Populus. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1093/ismejo/wrad012
Genomic Technologies
Metagenome
EMSL FICUS
Nguyen, T. M. et al. (2024) Metatranscriptomes of two biological soil crust types from the Mojave desert in response to wetting. Microbiology Resource Announcements. 10.1128/mra.01080-23
Fungal & Algal
Genomic Technologies
Community Science Program
Kraisitudomsook, N. et al. (2024) On the origin of bird’s nest fungi: Phylogenomic analyses of fungi in the Nidulariaceae (Agaricales, Basidiomycota). Molecular Phylogenetics and Evolution. 10.1016/j.ympev.2024.108010
Plant
Community Science Program
Mantel, S. J. et al. (2024) Postzygotic barriers persist despite ongoing introgression in hybridizing Mimulus species. Molecular Ecology. 10.1111/mec.17261
Metagenome
Director's Science, R&D, and Work For Others
Hartman, W. H. et al. (2024) Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient. mSystems. 10.1128/msystems.00936-23
Metagenome
Community Science Program
Tsola, S. L. et al. (2024) Methanolobus use unspecific methyltransferases to produce methane from dimethylsulphide in Baltic Sea sediments. Microbiome. 10.1186/s40168-023-01720-w