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Metagenome
Microbial
ETOP
Director's Science, R&D, and Work For Others
Esser, S. P. et al. (2025) Differential Expression of Core Metabolic Functions in Candidatus Altiarchaeum Inhabiting Distinct Subsurface Ecosystems. Environmental Microbiology Reports. 10.1111/1758-2229.70096
Metagenome
Viral
Hazard, C. et al. (2025) Beneath the surface: Unsolved questions in soil virus ecology. Soil Biology and Biochemistry. 10.1016/j.soilbio.2025.109780
Plant
Community Science Program
Sharma, R. et al. (2025) Plant genotype and rhizobia strain combinations strongly influence the transcriptome under heavy metal stress conditions in Medicago truncatula. Plant Stress. 10.1016/j.stress.2025.100854
Genomic Technologies
Plant
Community Science Program
Lötter, A. et al. (2025) A haplotype-resolved reference genome for Eucalyptus grandis. G3: Genes, Genomes, Genetics. 10.1093/g3journal/jkaf112
Metagenome
Community Science Program
McGivern, B. B. et al. (2025) Polyphenol rewiring of the microbiome reduces methane emissions. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1093/ismejo/wraf108
Metagenome
Microbial
Ndela, E. O. et al. (2025) Microorganisms thriving together as communities. Nature Reviews Microbiology. 10.1038/s41579-025-01199-2
Microbial
Community Science Program
Garcia Guzman, A. et al. (2025) Draft genome sequence of Dolosicoccus paucivorans DSM 15742T isolated from a patient's blood in Cleveland, Ohio.. Microbiology Resource Announcements. 10.1128/mra.01296-24
Fungal & Algal
Sperschneider, J. et al. (2025) A Chromosome-Scale Genome Assembly of the Flax Rust Fungus Reveals the Two Unusually Large Effector Proteins, AvrM3 and AvrN.. Molecular Plant-Microbe Interactions. 10.1094/mpmi-04-25-0047-r
Genomic Technologies
Metabolomics
El Abiead, Y. et al. (2025) Enabling pan-repository reanalysis for big data science of public metabolomics data. Nature Communications. 10.1038/s41467-025-60067-y
Metagenome
Viral
Fernández-Pato, A. et al. (2025) Early-life development of the gut virome and plasmidome: A longitudinal study in cesarean-born infants. Cell Reports. 10.1016/j.celrep.2025.115731
Microbial
Community Science Program
Smith, H. J. et al. (2025) Eight genome sequences of bacterial environmental isolates from Marr Pond, Antarctica. Microbiology Resource Announcements. 10.1128/mra.00135-25
DNA Synthesis
Bioenergy Research Centers
Huang, S. et al. (2025) A distinct class of ferredoxin:NADP+ oxidoreductase enzymes driving thermophilic ethanol production. Journal of Biological Chemistry. 10.1016/j.jbc.2025.110263
