Publications
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Fungal & Algal
Genomic Technologies
Min, B. et al. (2015) Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation. Journal of Biotechnology. 10.1016/j.jbiotec.2015.06.426
Fungal & Algal
Genomic Technologies
Doré, J. et al. (2015) Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis. New Phytologist. 10.1111/nph.13546
Metagenome
Microbial
Hadjithomas, M. et al. (2015) IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites. mBio. 10.1128/mbio.00932-15
Plant
Yang et al. (2015) A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world. New Phytologist. 10.1111/nph.13393
Genomic Technologies
DNA Synthesis
Christen, M. et al. (2015) Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis. ACS Synthetic Biology. 10.1021/acssynbio.5b00087
Microbial
Varghese, N. et al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Research. 10.1093/nar/gkv657
Metagenome
Beam, J. P. et al. (2015) Ecophysiology of an uncultivated lineage of Aigarchaeota from an oxic, hot spring filamentous ‘streamer’ community. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1038/ismej.2015.83
Microbial
Director's Science, R&D, and Work For Others
Mhamdi, R. et al. (2015) High-quality permanent draft genome sequence of Ensifer meliloti strain 4H41, an effective salt- and drought-tolerant microsymbiont of Phaseolus vulgaris. Environmental Microbiome. 10.1186/s40793-015-0005-1
Microbial
Smalley, N. et al. (2015) Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.. International Journal of Systematic and Evolutionary Microbiology. 10.1099/ijs.0.000190
Plant
Fiedler et al. (2015) High‐Density Single Nucleotide Polymorphism Linkage Maps of Lowland Switchgrass using Genotyping‐by‐Sequencing. The Plant Genome. 10.3835/plantgenome2014.10.0065
Metagenome
Microbial
Gilbert, D. et al. (2015) The Joint Genome Institute Offers Resources Beyond a Core Facility. Microbe Magazine. 10.1128/microbe.10.289.1
Metagenome
Microbial
Tschitschko et al. (2015) Antarctic archaea–virus interactions: metaproteome-led analysis of invasion, evasion and adaptation. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1038/ismej.2015.110