Publications
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Genomic Technologies
Community Science Program
Wetmore, K. M. et al. (2015) Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons. mBio. 10.1128/mbio.00306-15
Genomic Technologies
Microbial
Laviad, S. et al. (2015) High quality draft genome sequence of Leucobacter chironomi strain MM2LBT (DSM 19883T) isolated from a Chironomus sp. egg mass. Environmental Microbiome. 10.1186/s40793-015-0003-3
Plant
Lozano et al. (2015) Identification and distribution of the NBS-LRR gene family in the Cassava genome. BMC Genomics. 10.1186/s12864-015-1554-9
Genomic Technologies
Microbial
Chubukov, V. et al. (2015) Acute Limonene Toxicity in Escherichia coli Is Caused by Limonene Hydroperoxide and Alleviated by a Point Mutation in Alkyl Hydroperoxidase AhpC. Applied and Environmental Microbiology. 10.1128/aem.01102-15
Data Science & Informatics
Metagenome
Cantor, M. N. et al. (2015) Elviz – exploration of metagenome assemblies with an interactive visualization tool. BMC Bioinformatics. 10.1186/s12859-015-0566-4
Microbial
Alawi, M. et al. (2015) Genome Sequence of Methanosarcina soligelidi SMA-21, Isolated from Siberian Permafrost-Affected Soil. Microbiology Resource Announcements. 10.1128/genomea.00270-15
Plant
Lowe, C. J. et al. (2015) The deuterostome context of chordate origins. Nature. 10.1038/nature14434
Fungal & Algal
Genomic Technologies
Lichius, A. et al. (2015) Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype. BMC Genomics. 10.1186/s12864-015-1526-0
Plant
Smedley et al. (2015) The BioMart community portal: an innovative alternative to large, centralized data repositories. Nucleic Acids Research. 10.1093/nar/gkv350
Genomic Technologies
DNA Synthesis
Haushalter, R. W. et al. (2015) Development of an orthogonal fatty acid biosynthesis system in E. coli for oleochemical production. Metabolic Engineering. 10.1016/j.ymben.2015.04.003
Microbial
De Meyer, S. et al. (2015) High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512. Environmental Microbiome. 10.1186/1944-3277-10-13
Microbial
Labonté, J. M. et al. (2015) Single-cell genomics-based analysis of virus–host interactions in marine surface bacterioplankton. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1038/ismej.2015.48