Publications
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Metagenome
Community Science Program
Schada von Borzyskowski et al. (2019) Marine Proteobacteria metabolize glycolate via the β-hydroxyaspartate cycle. Nature. 10.1038/s41586-019-1748-4
Metagenome
Sieber et al. (2019) Unusual Metabolism and Hypervariation in the Genome of a Gracilibacterium (BD1-5) from an Oil-Degrading Community. mBio. 10.1128/mbio.02128-19
Fungal & Algal
Genomic Technologies
Álvarez-Escribano, I. et al. (2019) Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants. BMC Biology. 10.1186/s12915-019-0702-0
Microbial
Sahib, M. R. et al. (2019) Improved Draft Genome Sequence of Microbacterium sp. Strain LKL04, a Bacterial Endophyte Associated with Switchgrass Plants. Microbiology Resource Announcements. 10.1128/mra.00927-19
Genomic Technologies
LaPierre et al. (2019) De novo Nanopore read quality improvement using deep learning. BMC Bioinformatics. 10.1186/s12859-019-3103-z
Metagenome
Smith, M. W. et al. (2019) Genomic Signatures for Sedimentary Microbial Utilization of Phytoplankton Detritus in a Fast-Flowing Estuary. Frontiers in Microbiology. 10.3389/fmicb.2019.02475
Fungal & Algal
Metagenome
Badis et al. (2019) Hidden diversity in the oomycete genus Olpidiopsis is a potential hazard to red algal cultivation and conservation worldwide. European Journal of Phycology. 10.1080/09670262.2019.1664769
Metabolomics
Morton, J. et al. (2019) Learning representations of microbe–metabolite interactions. Nature Methods. 10.1038/s41592-019-0616-3
Metagenome
Microbial
Tringe, S. G. et al. (2019) A layered defense against plant pathogens. Science. 10.1126/science.aaz5619
Fungal & Algal
Genomic Technologies
Community Science Program
Navarro-Mendoza, M. I. et al. (2019) Early Diverging Fungus Mucor circinelloides Lacks Centromeric Histone CENP-A and Displays a Mosaic of Point and Regional Centromeres. Current Biology. 10.1016/j.cub.2019.09.024
Fungal & Algal
Genomic Technologies
Venice, F. et al. (2019) At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions. Environmental Microbiology. 10.1111/1462-2920.14827
Metabolomics
Metagenome
Plant
Brisson, V. L. et al. (2019) Impacts of Maize Domestication and Breeding on Rhizosphere Microbial Community Recruitment from a Nutrient Depleted Agricultural Soil. Scientific Reports. 10.1038/s41598-019-52148-y