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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by …

… archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and … experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and … detailed characterization of model systems to explore the dynamics of microbial ecosystems and their evolution. The …

… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … uncultivated phages.  Current Opinion in Virology .  49 , 117-126 Berg, M. and Roux, S. (2021) Extreme dimensions — how … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… they must utilize a broad range of the capabilities across at least two of the facilities, and generate datasets … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … which contains representative samples of the spatial, temporal, taxonomic (environmental, microbial, plants, …

… “Adopt a Genome” is an informal program for faculty to … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica …

… symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … rhizobacterium (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

Gary Trubl, a virologist and postdoc at Lawrence Livermore National … is using bioinformatics and isotopes to track how viruses influence the flow of carbon in permafrost.  …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, … of transcription factors and determine their binding sites across multiple genomes. Computational prediction of …

… genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through … Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. 10.1016/j.tim.2019.03.003 … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

Gary Trubl, a virologist at Lawrence Livermore National Laboratory, wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he first needs …