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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … Please include the appropriate Auspice Statement in any external publications, and include proposal Award DOIs following …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … the program offers single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and viral activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the … tools for analyzing viral fragments via IMG/VR and methods to capture  environmental viral populations. …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the …

… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here … … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh K. H., Lambie S. C., Cookson A. L., … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … symbiont infecting the nucleus of amoebae. The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, …