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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … with a list of JGI staff who contributed to their project, using the CRediT taxonomy ( credit.niso.org/ , with …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines …
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Publications
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Using BLAST to Teach “E-value-tionary” Concepts
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome … you here. Tell me what you think the terms we should be using for what we do are, and why there and why it’s … Episode Transcript … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … and its curation in our core processes. This allows us to provide diverse scientific communities with large amounts …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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FICUS
… The Facilities Integrating Collaborations for User Science … call represents a unique opportunity for researchers to request the capabilities and expertise of multiple DOE … focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an accelerated timeline …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural … and I talked about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, … frustration in the sense that I was doing all these manual BLAST searches and HMMER searches trying to find these gene …
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions — with … from diverse biological and environmental samples by using advanced computer analysis coupled with liquid …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… has got to be new, or at least we hope. This is what we’re using to get funding, but. DAN UDWARY: Well, you’ve seen … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … that we expect are in there. The only thing missing are the BLAST databases, which will generate as soon as we have the …
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