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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the …   and/or make substantial intellectual contributions to the production of a manuscript, it is best practice to credit …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact library types and quality …
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Publications
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Natural Prodcast Episode 20: Brian Bachmann
I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and enzyme systems to … analoging of some really complex bioactive natural product molecules. It’s a wide ranging conversation, and we could …
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Natural Prodcast Episode 7: Ben Shen
… of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … bond. And then you know, the rest of a natural product molecule around that. That’s sort of a semi-stable … are the biological version of the catalyst to catalyze the production of the natural product. So that was my PhD study, …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … for comparative analysis, visualization and interpretation using public datasets.  … The Integrated Microbial Genomes & …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … and then assemble those pieces, kind of like if you were sorting your LEGO pieces by color, right? You’re going to …
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Data Policy
Data produced and released by the US Department of Energy … Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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DNA Synthesis Program
… bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … plays a central role in advancing functional genomics, focusing on developing genetic systems that can address global … technologies and computational tools that enhance biofuel production and biosystem design. High-throughput design and …
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Natural Prodcast Episode 13: Francisco Barona Goméz
Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … at the end of the day, it’s because it is a hydrophobic molecule, flexible, that will confer one particular feature … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Sorting for secreted molecule production using a biosensor-in-microdroplet approach
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … synthesizing activity based probes which are basically molecules that will covalently attach through a more … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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