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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … Please include the appropriate Auspice Statement in any external publications, and include proposal Award DOIs following …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with … the program offers single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence …

Research in the Woyke laboratory focuses on the utility of … of microbial metabolism towards a minority of cultivated bacteria, still persists to date. Research Team    … … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

Biology is currently experiencing a revolution brought on by rapid developments in … efforts include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Find protocols provided by JGI and the JGI user community … preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here … … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … sequence to biological inference. … Genome sequences of key bacterial symbionts of entomopathogenic nematodes: …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the … project. It is imperative that users properly assess DNA or RNA mass prior to shipment to the  JGI. The documents below …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … Deciphering regulatory networks of secondary metabolite biosynthesis: We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma factor targets, and have expanded the …

National Prodcast. This continues our little section on international genome miners, and today we have Francisco … and Jones. I’m sure that people excited in natural product biosynthesis overall have had read some of their papers and … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … It The program fosters collaboration with U.S. and international scientists to drive innovations that align with … CO2 fixation, redox reactions, and plant metabolite biosynthesis, synthesizing and biochemically analyzing …