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… workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … experience and capabilities in the analysis, annotation, comparative analysis, and interpretation of sequence, …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …

The Metagenome Program uses advanced sequencing technologies to … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling … The JGI supports microbiome data science by enabling comparative genomics and metagenomics analysis through the …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and a lot of the really important recent events in data analysis and secondary metabolism over the last decade or …

Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … Dariia et al. (2023)  A standardized quantitative analysis strategy for stable isotope probing metagenomics … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …