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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for … maximize the impact of user research. The crucial elements are  proposal Award DOI(s), JGI’s ROR ID number, DOE …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … environmental sustainability. Fungi, with million species, are essential for ecosystem functioning — particularly in …

… the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide critical …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … is submitted to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the …

… product families we talk a lot about in this interview are the RiPPs, which stands for “Ribosomally synthesized and … marine organisms. Except during the time that we worked in fungi. But what do you see as the overall theme of your … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … in the earlier primers. In bacteria, at least, and in most fungi, biosynthetic gene clusters, which are the genes that … some marine. There’s some soil samples. There’s human gut samples. There’s lots and lots of– animal associated, …

… is a “fireside chat”-style podcast about natural products and the science and scientists of secondary metabolism. Natural products, secondary … make species unique and different from one another. They are incredibly important to medicine, the environment, and …

Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … talked about at the JGI meeting. DAN UDWARY: What’s your gut feeling about that sampling? Do you find different … of the soil, because there’s no secondary metabolites from anaerobic bacteria– something we know now is actually not …

So it was great to hear her passion and enthusiasm for fungi. And we talk a lot about some of the technical … from the University of Wisconsin. I wanted to say that you are the first person we’ve had on to talk about fungal … they only talk about the bacteria. My god! 30% of our gut microbes are fungi. It’s really frustrating to me. Maybe …

… bacteria so what’s – I guess that maybe you could say the gut is, kind of. But not the same way this is designed … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … working on that aspect and it’s quite active against some fungi. But we’re also really interested in distribution. So …

… it into the feeds, but I’m trying, you guys. Schedules are hard. But, I’m working on it because I really do want … about methane gas. And oftentimes people’s mind go right to anaerobic ecosystems. But these are actually– so methane– … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … contact Rekha Seshadri . …       " A lot of our students are working 20, 30, 40 hours a week outside of school . They …