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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Abiotic stress reorganizes rhizosphere and endosphere network structure of Sorghum bicolor
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Publications
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … so no programming knowledge and no dedicated compute infrastructure is required to perform computational analysis. …
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Natural Prodcast Episode 11: Marnix Medema
… paper on a new version of antiSMASH. But that gave so much stress around these deadlines, that we thought, OK, it’s … time. And we used a technology called “sequence similarity networking” of gene clusters, where you would make a network … able to assemble a really high quality metagenome of the endosphere microbial communities for all the bacteria that …
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Natural Prodcast Episode 15: Katherine Duncan
… talk about Antarctica, and we want to talk about molecular networking, because I really enjoyed the review that you … of natural products from invertebrates, mostly. Dan Udwary: Structure elucidation, yeah. Kate Duncan: Right, yeah, so … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that will help solve energy and environmental challenges. Sorghum stands out as a candidate feedstock for biofuels … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … JGI and EMSL Omics Tools introduces the NEON resource, a network of field research sites designed to collect …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … construct a bioenergy plant single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked … watering conditions, and then collected root, leaf and rhizosphere (soil surrounding the root) samples from the …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … and their hosts on ecosystems.   Environmental molecular network:   ENVnet   is a comprehensive, mass … us to uncover globally distributed molecules with conserved structures, offering fresh insights into DOM's composition. …
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