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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … resilience. The program’s discoveries support a plant based bioeconomy where plants are a major source of chemical … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in their natural … genomes the program offers single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of … the functional capability of microbial communities based on their metagenome sequence, in the context of …

JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

DNA synthesis and pathway engineering Mass spectrometry based metabolomics Below is a table of standard product … merit Assembly, annotation ( Mycocosm ) 256/404 Fungal Resequencing SNP and short indel calls, rearrangement detection, population analysis Text file of SNPs (incl location in …

… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … general feasibility prior to submitting a BER proposal that includes a JGI request.  Proposals whose scope was not … to sustainable, economically viable production of bio-based products and advanced biofuels. The center focuses on …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … families of genes that it searches for and uses a rule-based system that classifies the things that it finds into … that are no longer needed would end up being purged from populations. And that would go for chemistries as well. DAN …

… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE … 250 5.99 13,770.22 2100 2208 105 * Number of hours a week that sequencing machines are available to produce data. FY …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … pathways, enabling modeling of microbiomes based on functional traits. These advancements provide new … have enabled reconstruction of complete or near-complete population genomes directly from the environment. These …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … EA, et al. (2016) Metagenomics uncovers gaps in amplicon-based detection of microbial diversity.  Nature Microbiol . … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … roles in the environment, can unlock new avenues for bio-based products and bioenergy crop enhancement. The program … to facilitate the discovery of new bio-based molecules that can drive innovations in bioenergy, sustainable …