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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … the first analysis of data produced at the facility, provided this is done in a timely fashion. The publications …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … is to develop a deeper understanding of microbial community assembly and microbial interactions, including …

… “Adopt a Genome” is an informal program for faculty to “claim” the … genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

Below is a table of standard product offerings, including a description of the product and deliverables as well as … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … smRNA sequencing is no longer supported. For annotation: de novo assembly. For counting: text file of gene counts …

The Joint Genome Institute's DNA Synthesis Platform capabilities … subgroups: Synthetic Biology Lab : a user science group dedicated to user project design, assembly, and quality … & development group and focused on new technologies and optimizing tools — including strain engineering — to make …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support … research and sequence-based science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … high-performance application that produces high-quality de novo assemblies for very large-scale single genomes, based …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …

… systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … mass spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — …