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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the … navigate to the proposal info page using any of the below methods: Search the Genome Portal Navigate to the JGI Genome …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Resource Announcements. 2023 12 (10), e00548-23 Whole genome sequence of the denitrifying thermophile …
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Publications
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … antiSMASH has been sort of a good aggregator of different methods that people use when they’re doing homology …
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DNA Synthesis Program
… bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … in synthetic biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. … metabolite biosynthesis, synthesizing and biochemically analyzing enzymes to support mission-driven research. Rapid …
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Fungal & Algal Program
… vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the …
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda … File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank …
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Metagenome Program
… diversity and metabolic potential, with implications for energy production, environmental sustainability, and … global exploration. We develop computational tools for analyzing viral fragments via IMG/VR and methods to capture  environmental viral populations. …
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Products
… to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … on project Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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Single Cell Research Group
… the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Analyze Data
Chief Informatics Officer …
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