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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …

Research in the Woyke laboratory focuses on the utility of … effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed (or about one per student) Seven …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses … and viral activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … is definitely the most comprehensive set of tools for identifying gene clusters. There’s nothing that is quite as … similarity networking to prioritize a number of these candidates that we used an early version of BiG-SCAPE. And …

Biology is currently experiencing a revolution brought on by rapid developments in … (2016) Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs.  Nature Commun. … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … The promoter systems are different. We don’t have operons. It’s just getting that initial information, but …

The Facilities Integrating Collaborations for User Science (FICUS) call … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … available from all the facilities participating in the FY25 call, introduces the resources available from the …

Software engineers in the Synthetic Biology Informatics Group develop, deploy, … software includes: gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of …