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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … Institute (JGI) ( https://ror.org/04xm1d337 ) and the National Energy Research Scientific Computing Center (NERSC) …
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Partnerships: Adopt-A-Genome
… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed …
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Hot springs viruses at Yellowstone National Park have ancient origins and are adapted to thermophilic hosts
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … And then coming up after that, we’ll have a lineup of international scientists who also do genome mining. We’ve got a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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Publications
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Viral Genomics Group
… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Microbiome Data Science Team
S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . … reveals a new bacterial candidate phylum in geothermal springs.  Nature Commun. 7:10476 Varghese NJ,  et al. … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Institutional User Agreements
… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … requirements as other academic lead institutions. OTHER DOE NATIONAL LABORATORIES:  A version of the Bilateral DOE …
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Natural Prodcast Episode 1: The Primer, Part 1
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … of Science User Facility located at Lawrence Berkeley National Laboratory. Being a User Facility means that … see it. DAN: So what we’ve got here is, I just grabbed a photo of a “biochemical pathways” chart. So if you spend any …
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Metagenome Program
… technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, … archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and … DNA in natural environments, the Program provides a snapshot of microbial diversity and their metabolic functional …
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Natural Prodcast Episode 3: The Primer, Part 3
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … JGI in this area. If this series of podcast episodes has sparked your interest, and you want to learn more, then I … of Science User Facility located at Lawrence Berkeley National Lab. You can find links to transcripts, more …
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