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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of … The Secondary Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics capabilities to … products and the science and scientists of secondary metabolism. As the JGI acts on its goals in — and builds out …
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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …
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Natural Prodcast Episode 15: Katherine Duncan
… that’s just incredible to think about. And then, from an genomic point of view, I mean, I don’t need to say to you, … What tacts are particularly interesting? And then linking that to antibiotics, and do they have antibiotic … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Secondary Metabolites Advisory Committee
The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. The Committee is chartered to render advice, guidance, and counsel on the effective …
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Natural Prodcast Episode 10: A Primer on Genome Mining
As always, you’ll find transcripts and show notes with links to lots of other resources, especially for these … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… where this is all explained in detail, so if you’d like a link, just check out the show notes above or at … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform … genomics research and to help them translate genomic information into biological function.  The emphasis is on …
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Publications
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …
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Natural Prodcast Episode 1: The Primer, Part 1
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the … that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe … located at Lawrence Berkeley National Lab. You can find links to transcripts, more information on this episode, and …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… at naturalprodcast.com — I went a little overboard with links on this, since I’m hoping this episode and the … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Microbial Program
… cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying … The program provides high-quality, large-scale genomic data to advance microbial research that drives … environments using single cell approaches. This includes linking strain-level genetic variation to ecological niche …
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