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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

… “Adopt a Genome” is an informal program for faculty to “claim” the … that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and algae. …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … it is that secondary metabolism is ancient and, therefore, widespread. So if secondary metabolism was there when– and …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and seeking to interpret function from BGCs. It’s a long, wide ranging conversation and I’m so happy we got the chance … had just not  been released yet. And there was also some transcriptome data. And my first task during that project …

… this identification, metabolomics enables functional genome annotation, improves understanding of the role small … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, … as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified using LC-MS/MS …

Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … DNA design and synthesis, metabolomics and computational analysis that enable systems-based scientific approaches to … as a national user facility, and has grown to serve a worldwide community of more than 2,000 primary users—those who …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … and to understand their evolution. It was a fun, wide-ranging conversation, where we talked about our shared …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … automatically identified from genomes, metagenomes, and metatranscriptomes. It provides rich data such as inferred host …

… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … … The Mycocosm portal supports the annotation, comparative analysis, and distribution of fungal genome datasets. It … and publicly available datasets encompassing a wide array of fungal genomes, along with curated metadata to …