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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … experience and capabilities in the analysis, annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … Other projects in the group include the sequencing and comparative analysis of thousands of archaeal and bacterial … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …

Developed in 2017, the PDT was established in part to help … high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. … … For additional information about SSP or CRADA partnering mechanisms, visit Berkeley Lab’s  Innovation and Partnership …

… not in natural products, these were in studying regulatory mechanisms of, first, E. coli and then Rhodobacter … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … uncultivated viral diversity, characterization of molecular mechanisms involved in virus:host interaction and host cell … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …

I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great … genome mining software we mentioned: “ EvoMining reveals the origin and fate of natural product biosynthetic …

… and the bacteria and how the chemistry is going back and forth between them is part of what fascinates me about what … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … honeybee. And so I have multiple opinions which I’m never short of but. In terms of thinking about these sparse …

Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … are also lifted at publication of the data. In short, those users not involved with the proposal under …

… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … was it the case where that colleague saw a potential mechanism for why there would be this streamlining? NADINE … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …