Search

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … diversity and metabolic potential, with implications for energy production, environmental sustainability, and …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the … of collaborators and users. For example if, by agreement with the collaborator, JGI staff take a lead role in the …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

… pathways. And today, we get to present our conversation with Marnix Medema , from Wageningen University in the … genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …

… components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … and exa- scales on multicore and many core architectures with the ultimate objective of facilitating omics-based …

… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with … to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …

… enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome …