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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … an extensive internal product audit to analyze the scientific value, demand, and costs of current offerings in … short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole …

… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: … RNA Extraction …

The Scientific Advisory Committee (SAC) is a board convened by … JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, … sequencing, new sequencing technologies, and related informatics; overview of the scientific programs at the JGI; …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … Genomes & Microbiomes system ( IMG/M ) supports the annotation, comparative analysis, and distribution of …

… and coordination with IMG , GOLD and others for data annotation and submission Tracking, monitoring and … notified as projects reach specific milestones, either by automated emails or emails from your Project Manager. Your … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at … more customized analysis, the JGI also participates in publication of results. See more details on our Review …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … with the ultimate objective of facilitating omics-based scientific investigations. Development and maintenance of …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … manager for alternate solutions. … The PI will receive an automated email once the samples are received and checked …

Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as …