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Secondary Metabolites Program
… algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … The program works to uncover these hidden biochemical resources by exploring the genetic pathways responsible for … community can upload new data for use by scientists and the public, and provide programmatic access to all sequence and …
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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … users, collaborators and JGI together aim to publish the first analysis of data produced at the facility, provided … (proposal: INSERT PROPOSAL AWARD DOI(S) HERE) and used resources at the DOE Joint Genome Institute ( …
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Secondary Metabolites Advisory Committee
The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. The … scientific relevance and quality. The Committees do not perform management functions nor do they direct the Programs’ …
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Publications
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Metabolomics
… of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse … At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of experimental … & Metabolomics Instrumentation … Metabolite Submission Resources & Guidelines … Metabolomics Platform Lead … More …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … japonica DSM16522 R Robertson, et. al.  2023 . Microbiology Resource Announcements. 2023 12 (10), e00548-23 Whole genome … Matt Escobar,  CSU San Marcos          "This was our first paper . It was definitely interesting going through …
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Metabolomics Program
… biogeochemical processes, development of high performance plants and microbes, and understanding microbiome … and ecosystems. Identifying and analyzing primary and secondary metabolites helps uncover their roles in processes … … Projects and Initiatives … Metabolomics Program Head … Resources and Tools …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, and specialized metabolites all refer to the … JGI acts on its goals in — and builds out its capabilities for — secondary metabolism research, “Natural Prodcast” …
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Natural Prodcast Episode 12: Nadine Ziemert
… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … with the computer work, right? Which I had to get into first, and the standing trees. And he had this whole idea of … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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JGI Portals
Our data platforms are a key resource for the broader scientific … resource for comparative analysis and annotation of all publicly available genomes from three domains of life, in a …
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Natural Prodcast Episode 14: Nigel Mouncey
Nigel Mouncey. DAN: I’ll start by saying this is the first in-person recording that I’ve done since that first … at JGI. We don’t have the infrastructure. It’s too many resources for us. So we need good people to partner with. … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 1: The Primer, Part 1
… secondary metabolism.  DAN: Hey there, and welcome to the first episode of Natural Prodcast. First, maybe, a little … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … they don’t have available in their labs, and we use our resources to help them solve those problems. It’s a …
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