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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, … isolate it. The JGI provided a range of constructs based on sequences for MAR enzymes from different organisms to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
Learn more
JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her … doi: 10.1038/s41467-017-01408-4. Tyson GW et al. Community structure and metabolism through reconstruction of …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding … Impact By collecting and sequencing dominant haloarchaeal sequences from six hypersaline lakes, researchers focused on … applications. The work has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his team …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential … carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing … being assembled. These resources would provide the research community with the ability to address questions such as …
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  (LBNL and … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the … the Desert Research Institute. Metagenomic and single-cell sequence data have provided a means to access novel …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. … (Berkeley Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, Ace … This work was supported by the Australian Research Council (DP150100244) and the Australian …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… This year’s list features 6,900 researchers working in 21 fields.  … Nikos Kyrpides  and Simon Roux — features 600 genome sequences for Actinobacteria.  Woyke  was also one of three … .  ID’ing RNA viruses with ease : Searching for RNA sequences within a database can be like combing for the …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the … user facilities. Baker had worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared … This work was supported by an intramural seed grant (IGSP 2008001) to …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of … developed and applied novel computational and experimental sequence-based methods for elucidating the gene regulatory …
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