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Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of …
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Supercharging SIP in the Fungal Hyphosphere
… communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close …
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of … on our website. The approved proposals start October 1, 2022. See the full list of awardees below: …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel … and hard work have carried it through the difficult early stages, so I can begin biological analysis of the data sooner …
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I-Min (Amy) Chen
Genomes (IMG) family of systems. Before joining LBNL in 2006, she was Director of Application Development Systems at … et al. IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata. Nucleic acids … K, and Chu K. Maintaining a Microbial Genome & Metagenome Data Analysis System in an Academic Setting, SSDBM …
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Back to the Future! A Sorghum Story
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. … Sanger Institute and Cambridge University University in 2005, where he studied RNA editing and cancer genetics. Dr. … and to understand genome function in bacteria. Since 2016, he has been the lead of the User Support Analysis …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a … lab. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de …
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JGI Announces 2025 New Investigator Portfolio
… a list of researchers whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will … call; the next deadline for proposal submission is Sept. 9, 2025, for inclusion in the November 2025 review. You can …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were … to re-visit the Olpidium genome data . Taking the advantage of rapid development of binning methods, we were able …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… (Berkeley Lab) took on the Open Green Genome Initiative in 2018 as part of its Community Science Program. The OGG has … over seven million repetitive elements that account for 85.2% of the C-fern assembly. While they did identify a couple … US Department of Energy operated under Contract No. DE-AC02-05CH11231.This work was supported by US National Science …
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