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PhycoCosm Tutorial
US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara Calhoun and …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… these symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), as well as …
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Massie S. Ballon
Cruz. She is one of the Biosciences Area representatives to Berkeley Lab’s Inclusion, Diversity, Equity & Accountability (IDEA) Chairs Council.   … 2020-2021, UC Women’s Initiative (North Cohort) UC Managing …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), shows methanogenesis is not … to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the …
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I-Min (Amy) Chen
… management tools for scientific applications developed at Berkeley Lab. Dr. Chen is currently the Microbiome Computational … et al. IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata. Nucleic acids …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to … pool of talent for career opportunities at JGI and Berkeley Lab. …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … JGI is partnering with NVIDIA and Oak Ridge National Laboratory (ORNL) to make sure our computational workload … codes are ported to the architectures we will have available.” A maximum of six teams will be hosted at the …
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Doubling Down on Known Protein Families
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and collaborators across multiple … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data … User Executive Committee, on how that study went from the lab to the classroom. …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds … Institute, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science … latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… a number of notable achievements that showcase our collaborations and capabilities to enable great science that … crisis, Matteo Garbelotto joined the faculty at UC Berkeley to lead the Forest Pathology and Mycology … the SODmap Mobile app enabled SOD Blitz participants to geotag specimens they collect. Later, those are annotated with …
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