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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … derivatives of natural products.  ALISON: Like such a large diversity can have similar effects, I think is also really …
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Genome‐based evolutionary history of Pseudomonas spp
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The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
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Plant–microbiome interactions: from community assembly to plant health
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … the estimated diversity of Bacteria and Archaea With phylogenetic diversity standing in as a representative measure of …
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … the Physics Department and in 2002 he became a Professor of Genetics, Genomics and Development after his research …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … as other year-end science discovery lists.  Updates to the Genomic Encyclopedia of Bacteria and Archaea : Under the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Biodesign
… automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … developed to the point that you could understand the genetics of secondary metabolism, it became possible to do … of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, …
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New and Improved: Eucalyptus Reference is Now Accessible
… in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances compared to the 2014 … This allows for more accurate and detailed comparative genomic analyses.   The Impact There are 900 species of eucalyptus. … Myburg, Wegrzyn, Borevitz) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …
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Root Exudates Alter the Expression of Diverse Metabolic, Transport, Regulatory, and Stress Response Genes in Rhizosphere Pseudomonas
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