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Leo Baumgart
… his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation and method … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … access to diverse datasets that deepen our understanding of how organisms interact with each other and with their …
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Open Frameworks Training the Next Generation of Scientists
… technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological Curriculum for … Biology Knowledgebase (KBase). The JGI and KBase are both supported by the DOE Biological and Environmental Research …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … researchers to use them for engineering applications in support of advancing the bioeconomy.  This year’s project …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are stealth agents … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … could be used for renewable fuel. In fact, lipids can make up more than 90 percent of the microbe’s dry weight. In … these gobs of energy, a team of researchers sought to disrupt every gene in the genome with CRISPR-Cas9 in order to …
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JGI announces final round of 2022 Functional Genomics awardees
… Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a … an estimated 2–6 million species — dwarfing the diversity of plants. To put this evolutionary timescale in … National Laboratory, is committed to advancing genomics in support of DOE Office of Science Biological and Environmental …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … provide a list of machine parts, and an idea of their groupings.  One pivotal effort along these lines came from UC … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot … a deeper understanding of both the research process and metagenomics while legitimately contributing to the body of … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … large-scale data, and professional expertise to support the global research community in studies of complex …
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