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The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …

… and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … microbial lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, …

Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … metagenomics. Taking on a Research Scientist position in 2007, she switched gears from metagenomics to single-cell … primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed …

Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He received … on computational and experimental approaches to study genome regulation in human and other vertebrate genomes. … Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer …

Large-scale comparative analysis leads to identification of … metabolites for multiple applications The planet’s microbial diversity is immense, yet much of it remains … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by …

To expand access to integrated data, improve tools and infrastructure … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …

A workflow for capturing the genetic make-up of specific uncultivated … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk community sequencing …

Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) …

Our research is focused on the discovery and characterization of novel … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology volume 20, 721–736 JC Villada, F Schulz (2022) The endosymbiotic box of …