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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the … .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … support of our goals,” said Mouncey. “Creating transparency about our efforts is critical for enabling complementary and …
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Integrating Experimentation with Data
… data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic panel discussions, informative poster sessions, thought-provoking … Biological and Environmental Research (BER) program.   … About the Organizers … Stefani Ferreira , administrative …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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JGI Announces 2025 New Investigator Portfolio
James Tan, Emma Timmins-Schiffman, Andressa M. Venturini, Valentin Waschulin, Flavia Winck Vischi, Jennifer Wisecaver, … novel research projects from PIs who have not led any previously accepted proposals.  The New Investigator call , part … November 2025 review. You can also find more information about the JGI’s  various proposal calls here. …
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FICUS-NERSC/KBASE
Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the … for proposals in biological data science as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase … The ranked proposal list, along with a recommendation from management at JGI and the other participating facilities, is …
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Partnerships: Adopt-A-Genome
Department of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the … the next generation of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed (or about one per student) Seven student-drafted articles …
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Strategic Integration of Multiple Bioinformatics Resources for System Level Analysis of Biological Networks
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Kjiersten Fagnan
Research Division.. As a postdoc, her research focused on stable and accurate computational methods for … … The Chief Informatics Officer provides advice and strategic direction for the overall design and … 2018 NERSC, CRD Petascale Postdoctoral Fellow … Education … About the JGI Chief Informatics Officer … Selected …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… viridis), a small model grass with a short lifecycle that uses a carbon fixation process known as the C4 pathway, … enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest supporter of … please visit  energy.gov/science/office-science . About The Donald Danforth Plant Science Center: Founded in …
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I-Min (Amy) Chen
… her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data management. She was one of the co-authors and key developers … updates and new features. Nucleic acids research Jan 2023 Camargo AP, Nayfach S, Chen I-MA, Palaniappan K, Ratner A, …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
Studying the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but … To access the genomes of uncultured  microbes , scientists usually employ two different methods; shotgun metagenomic … that were acquired through it were usually only around 30% complete.  Described in  ISME Communications , a method …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and … The ranked proposal list, along with a recommendation from management at JGI and the other participating facilities, is …
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