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An Earth Month Look at Sustainability Efforts at the JGI
… DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and is …
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An Addiction Crucial to a Fungus’ Reproduction
… (symbionts) are transmitted between host generations, researchers investigated the role that bacteria living within … with their soil fungus host, Rhizopus microsporus . Researchers found that endobacteria establishing control over … with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow Laboratory for Ocean … isolated from the microbes found in the oil plume from Deepwater Horizon oil spill led to a draft genome of the … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …
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Training the Next Generation of Talent
… UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy Joint Genome … saw a few familiar faces, one of them belonged to his research adviser Axel Visel. Both Visel and another DOE JGI … for building and maintaining cells through the use of deep-sequencing technologies. The internship program was …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic … conducted her postdoctoral training in human microbiome research at the Institute for Genome Sciences at the …
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Streamlining Regulon Identification in Bacteria
… can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of regulon … the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. … transcription factors and even other organisms can fuel a deeper understanding of these transcriptional regulatory …
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Supercharging SIP in the Fungal Hyphosphere
… novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … Applying this method to the study of a particular fungi, researchers identified novel interactions between bacteria and … their DNA can be tested for the isotope, which tells researchers which microorganisms used the labeled substance …
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Three Join the JGI User Executive Committee
… base, including both university and national laboratory researchers. This will help the JGI shape its programs, … Evolution and Marine Biology at UCSB, where she leads a research group investigating the physiology and evolution of … will advocate for programs supporting early career researchers and new users, advise on data release and sharing …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… remain silent under standard laboratory conditions. Researchers with the Department of Energy (DOE) Joint Genome … The team also identified previously unknown promoter sequences within these gene clusters, offering new … efforts support the DOE’s Biological and Environmental Research program’s efforts in advancing genome-based …
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Trent Northen
… Northen has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy Institute and … methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with …
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Massie S. Ballon
… as well as help cultivate the next generation of genomic research users, partners, and collaborators.  Ms. Ballon is a … see the coverage of JGI-enabled science highlighting user research, newly accepted proposals, and outreach efforts.  …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
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