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2025 NeLLi Symposium
… the University of Nevada, Las Vegas, and the Desert Research Institute, the 2025 NeLLi Symposium delves into the … In this 2025 Symposium, we will showcase the latest research on the evolution of cellular complexity, the tree of … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the …
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Viral Genomics Group
… they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our … Group is hosted within the Environmental Genomics group . Research Team … Research Team Alumni … Research Areas …
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Boosting Small Molecule Production in Super “Soup”
… As  reported August 26, 2021, in  Nature Communications , researchers led by Hal Alper at The University of Texas at … student Xiunan Yi visited the Jewett lab to provide a seamless transition between the  in vivo  (within the … arriving every couple of months. The question for the researchers was, would the reactions in these engineered yeast …
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Charting Progress toward Professional Goals
… apply for internships and work onsite with an experienced researcher who serves as their mentor. By contributing to … people in my group and my mentor looked over and was like, “why are you explaining phylogeny to people who have been … I would say the biggest challenge for me was my research results not being the most promising. Going into the …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… invested in being the bridge to help scientists and researchers achieve their analysis goals. Offering this tool … Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s … assembly. So while researchers are confident all the DNA sequences came from one cell, including components like …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… National Laboratory (Berkeley Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and is …
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Tracking the Origins of Methane-Producing Microbes
… in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan Zuckerberg … Yellowstone National Park’s Obsidian Pool hot spring. The researchers applied mini-metagenomics to these samples by … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 …
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Promoting the Power of Viral Metagenomics
… the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos Kyrpides , … animal intestines (including humans), grassland soils, even deep-sea hydrothermal vents – and computationally identifying which sequences represent viruses that were present in the sample. …
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Transcriptomic data sets for Novosphingobium aromaticivorans DSM12444 and a ΔSARO_RS14285 mutant grown in the presence of glucose and either protocatechuic, vanillic, syringic, or 4-coumaric acid
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The Expanding Universe of Methane Metabolisms in Archaea
… known methanogens. With the help of this information, the researchers found evolutionary relationships between … known number of Korarchaeota genomes, which helped the researchers position the lineage within the archaeal domain. … The information, Inskeep added, could also help in the search for a last common ancestor between Archaea and …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” a computer … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes …
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FICUS Overview
… was established in 2014 to encourage and enable researchers to more easily integrate the expertise and … Office of Science National User Facilities into their research. In recognition of the increasingly collaborative and … projects, this initiative aims to encourage innovative research exploiting a diversity of capabilities. Previously, …
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