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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… bioenergy security for a steadily growing worldwide population. Anuvia Plant Nutrients , a small Florida business producing bio-based plant nutrition products that target soil enrichment, is partnering with … (Berkeley Lab), to help drive discoveries that will render new economic advantages for farmers concerned with improving …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the … and Roux also worked together on the development of a new software tool called geNomad that identifies and … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … prediction approaches, researchers have created a new program called iPHoP (pronounced “eye-pop”,  freely …
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A Model System for Perennial Grasses
… complete genomes from varieties that diverged over a million years ago. The hallii variety thrives in desert … Through the JGI’s Community Science Program , JGI sequenced and assembled near-complete genomes of P. hallii … complete) and P. hallii var. filipes (94.8% complete) and resequenced a host of natural collections from across the …
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Soil virus offers insight into maintaining microorganisms
… researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, … AMGs in soil viruses thought to break down chitin, the gene sequences were cloned by the JGI.  The JGI’s DNA synthesis … genes and mutants. DOIs of publicly available chitosanase sequences were retrieved using the  JGI’s Integrated …
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Gut Fungi: Unexpected Source of Novel Chemicals
… and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from aerobic … can whip up dozens of complex natural products, including new ones. The Impact In the past, natural products have been … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently published a Nature … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … a list of talks relevant to JGI science at PAG XXVII. On January 14, JGI Plant Program head Jeremy Schmutz and  … integrative biology. Researchers who are applying genomic sequence information to BER-funded activities of plant …
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Igor Grigoriev
… at the JGI, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and … Biology at University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists …
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JGI Scientists Pen Genome Watch Articles
… of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an … lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, inviting the …
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