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I-Min (Amy) Chen
I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data … v.7.0: content updates and new features. Nucleic acids research Jan 2023 Camargo AP, Nayfach S, Chen I-MA, … taxonomic, and ecological metadata. Nucleic acids research Jan 2023 Camargo AP, Call L, Roux S, Nayfach S, …
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What Happens Underground Influences Global Nutrient Cycles
… 11 proposals for support from 53 received through a joint research call. Submitted proposals addressed one of the … Biogeochemistry, and Inter-organismal interactions. Algal research features prominently among the eleven proposals … library in Chlamy, as the alga is colloquially known by researchers. A missing gene from this mutant library leads to …
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A Plant Root Atlas for Tracking Developmental Trajectories
Cell and provides a community resource that could help researchers track cell development and how they determine … One of the study’s co-authors is  Benjamin Cole , a research scientist at the U.S. Department of Energy (DOE) … to the paper also aligns with his DOE  Early Career Research Program (ECRP) award, which is also focused on …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
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Kjiersten Fagnan
… postdoctoral fellowship at NERSC and LBNL’s Computational Research Division.. As a postdoc, her research focused on stable and accurate computational methods … team at the Supercomputing conference, SC’18, led by researchers at Oak Ridge National Laboratory. Dr. Fagnan has …
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Tanja Woyke Elected to American Academy of Microbiology
… among the Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on developing and harnessing single-cell … Woyke, two JGI users were also elected to the AAM: fungal researcher Jason Stajich of the University of California, Riverside, and virus ecology researcher Matt Sullivan of The Ohio State University. Luis …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Congratulations to the 2023 Highly Cited Researchers from the JGI recognized for their “significant … Analytics. This year’s list features 6,849 individual researchers from 67 countries. Those from the JGI whose … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …
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Tracing the Evolution of Shiitake Mushrooms
… mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … as well as atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples …
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Waiting to Respire
… reported January 28, 2019 in Nature Communications , two research teams joined forces and data sets to describe … dubbed Saganbacteria. At the same time, working with researchers from the Bigelow Laboratory for Ocean Sciences, … (JGI), a DOE Office of Science User Facility, and research scientist Frederik Schulz in Woyke’s Single Cells …
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Access to Rock Star Scientists
… summer 2018 internships in Walnut Creek. The students’ research culminated in presentations on their work delivered …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Most of the attention on Olpidium was from agricultural research. Several species of Olpidium are obligate … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and is …
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Katherine Louie
… in development of new, advanced mass spectrometry research products such as stable isotope probing (SIP) to …
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