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Computationally Classifying Fungal Lifestyles
… enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward … and also provides more information about speciation events. … The work conducted by the U.S. Department of …
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Building Sphagnum Genomic Resources
The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant … the ecosystem response to climate change. Through the CSP, researchers are aiming to have two high quality …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… of scientific presentation, interactive panel discussions, workshops, and informal networking events. JGI will present both a genome center talk and a …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… richardii show a long history of dynamic evolution and rapid changes in both genome content and structure following a … the C-fern assembly. While they did identify a couple WGD events, these events could not fully account for the size and complexity …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of their internal sequence similarity, they enable gene copies to fold back on each other and thus be used as … and the National Key Project for Basic Research (2012CB114504). The work conducted by the U.S. Department of …
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A Plant Root Atlas for Tracking Developmental Trajectories
Lab  Biosciences Area has been leading efforts in developing and applying plant single-cell capabilities for DOE … Cole, have been leading these efforts, which included two  workshops with resulting reports and a  perspective article … Plant Single-Cell Solutions for Energy and the Environment Workshop Report Biosciences News:  Plant Single-cell …
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Nick Everson
… the Safety, Finance, Human Resources, Facilities, IT, Shipping and Receiving, Lab Automation, and Administration … He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics activities.  He … health and safety, and business issues. … Selected for the 2012 LBNL “Emerging Leader Program” at the UC Berkeley Haas …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
Berkeley National Laboratory (Berkeley Lab) hosted a pitch event promoting fully-supported summer research … members and students who participate. The researchers who pitched potential collaborations were: Simon Roux and … are due on January 12, 2022. Faculty interested in developing proposals with JGI and Biosciences Area researchers …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… from Berkeley Lab. On June 24, in what was billed as a typical monthly JGI All-Hands Meeting, after a couple of … and renovation of Building 310, adding the crowning piece of the entire 80,000 square foot, three-building … Ray hired in 2007 to serve as JGI’s Business Manager. In 2012, Nick jumped the good ship JGI in favor of a step up as …
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Accelerating Metagenomics Discoveries with Deep Learning
… their works-in-progress with 86 participants in an online workshop to harness deep learning for metagenomic data.  … layers. The architecture of these algorithms, inspired by communication networks found in nature, allows … and distinguish it from your friend’s. Biologists aim to capitalize on these kinds of abilities by applying them to …
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JGI@25: Using Team Science to Build Communities Around Data
… launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of … of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… to reuse and compare data. “So we thought, let's go on a pilgrimage. Let's make a difference, from a different direction — and that's helping people do a better job curating the data,” Wilhelm … JGI users and collaborators gathered for a SIP-focused workshop at the JGI in the fall of 2024. “ We wanted to get …
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